| SoftGenetics Products -
GeneMarker AFLP/Genotyping Software
GeneMarker™
GeneMarker™ AFLP/Genotyping software has been designed and
created in order to provide genetic researchers with a highly useable
genotyping analysis tool. We incorporated the suggestions and requirements
of several research groups into the software. Their main requirements
were ease of use, high accuracy, flexibility and low acquisition
cost.
GeneMarker can perform analysis on up to 1,000 lanes of data generated
by either slab gel or capillary electrophoresis.
Nearly every function of GeneMarker has been automated so that
once the template is selected from the menu, or created by the user,
the software will automatically perform the analysis, providing
a myriad of display and reporting options. Once the analysis has
been completed and confirmed the software saves all of the analysis
parameters, raw data and results for easy archiving and call back
at a future date.
GeneMarker for AFLP Analysis |
GeneMarker for Fragment Analysis |
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GeneMarker is an excellent tool for nearly all of Genotyping applications.
The exclusive gel image provides a quick overview of the AFLP analysis,
allowing rapid discernment of areas of interest. In the Fragment/microsatellite
mode, the soft ware provides a quick 4 or 5 colour overview of the
analysis.
In both cases an exportable text report that can be that can be
easily dragged open is provided for rapid viewing of analysis results
by wavelength (colour).
Raw Data |
Quality Control of Sizing |
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GeneMarker provides a lane
by lane overview of unprocessed raw data, permitting a quick
quality control of the data. |
GeneMarker provides a quality
control graph indicating the linearity of the size call of
each lane. |
Simple, Easy Operation |
Auto Run Wizard |
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Once analysis parameters
have been set or saved, two mouse clicks, (data entry, and
then run) are all it takes to run an analysis on up to 1000
lanes of capillary data. |
GeneMarker’s Run
Wizard makes parameter setting easy and straight forward.
Previously saved parameters can be applied to subsequent analyses,
increasing consistency while reducing analyst set up time.
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Analysis Parameter Setting Made Easy
GeneMarker’s wizard simplifies parameter setting by “walking”
the user through 3 simple steps. Templates can either be selected
from several embedded templates or the user can create and save
additional templates; detection settings are presented in one dialogue
box that creates required flexibility in a simple to use format.
Panel management and creation requires only a few mouse clicks!
Once set the parameters can be saved and called back for future
analysis.
Analysis Reporting |
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Analysis results can be
sorted and manipulated to meet report requirements and then
saved as a text file or input into LIMs or other data base
systems. |
GeneMarker will print reports
of analysis for either all or selected sample sets. User can
choose to include electropherograms, analysis text, and output
sequence. |
GeneMarker Software for Terminal-Restriction
Fragment Length Polymorphism (T-RFLP) Data Analysis
 Download
the T-RFLP
PDF 
(198Kb)
For more details, download the Mutation
Surveyor Software v2.5 PDF
(518Kb)
Download
the full Genemarker
Software PDF
(1.01Mb)
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